a bacterial genome annotation system designed for NGS data. Published in PLoS One.
UniprotKB + GeneOntology + NCBI taxonomy + RefSeq + Expasy Enzyme, integrated in a graph DB with easy AWS deployment. Manuscript under preparation
A Scala library for working with modules with explicit dependencies, with some specifics for AWS, like declaring and applying immutable EC2 instance configurations.
A Scala library designed for declaring and scaling stateless inherently parallel computations using AWS
a cloud-based metagenomics analysis tool. Manuscript under preparation
a Scala library for typed graphs: define vertex and edge types, their properties, graph schemas and write type-safe queries over them.