ohnosequences!

era7 bioinformatics R&D group

Gene Ontology (GO) graph visualizations for EHEC automatic annotation of BGI V4 assembly

Hi everyone!

A couple of days ago I published a post describing how to obtain cool GO annotation visualizations with Gephi + Bio4j. As an example I used data from one of the first assemblies for the **EHEC **genome, and I was wondering today: Why not using the last version from BGI assembly we annotated with our great BG7 bacterial genome annotation pipeline and put together the visualizations for the three sub-ontologies? Here you have the result:

Biological Process

(Please click on the image above to check the zoomable version)

Molecular Function

(Please click on the image above to check the zoomable version)

Cellular Component

(Please click on the image above to check the zoomable version)

Have a good weekend! ;)

@pablopareja